Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.03□□□□□ -0.16
Ift88Q61371 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.03□□□□□ -0.16
Ift88Q61371 Gm8463-201ENSMUST00000208573 613 ntBASIC14.03□□□□□ -0.16
Ift88Q61371 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.03□□□□□ -0.16
Ift88Q61371 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.03□□□□□ -0.16
Ift88Q61371 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ift88Q61371 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.02□□□□□ -0.16
Ift88Q61371 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.02□□□□□ -0.16
Ift88Q61371 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.02□□□□□ -0.16
Ift88Q61371 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.02□□□□□ -0.16
Ift88Q61371 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ift88Q61371 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.02□□□□□ -0.16
Ift88Q61371 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ift88Q61371 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ift88Q61371 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Gm13123-201ENSMUST00000122173 492 ntBASIC14.02□□□□□ -0.17
Ift88Q61371 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.02□□□□□ -0.17
Ift88Q61371 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.02□□□□□ -0.17
Ift88Q61371 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.02□□□□□ -0.17
Ift88Q61371 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.02□□□□□ -0.17
Ift88Q61371 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.02□□□□□ -0.17
Ift88Q61371 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ift88Q61371 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.02□□□□□ -0.17
Ift88Q61371 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.02□□□□□ -0.17
Ift88Q61371 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ift88Q61371 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.01□□□□□ -0.17
Ift88Q61371 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ift88Q61371 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.01□□□□□ -0.17
Ift88Q61371 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ift88Q61371 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ift88Q61371 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.01□□□□□ -0.17
Ift88Q61371 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ift88Q61371 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Gm38671-201ENSMUST00000200573 130 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ift88Q61371 Gm45668-201ENSMUST00000211271 493 ntBASIC14.01□□□□□ -0.17
Ift88Q61371 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms