Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.25■□□□□ 0.03
Mre11Q61216 Gm24245-201ENSMUST00000157318 57 ntBASIC15.25■□□□□ 0.03
Mre11Q61216 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.25■□□□□ 0.03
Mre11Q61216 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.25■□□□□ 0.03
Mre11Q61216 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.25■□□□□ 0.03
Mre11Q61216 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Mre11Q61216 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mre11Q61216 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Mre11Q61216 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Mre11Q61216 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mre11Q61216 Gm43075-201ENSMUST00000198613 3905 ntBASIC15.24■□□□□ 0.03
Mre11Q61216 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.24■□□□□ 0.03
Mre11Q61216 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Mre11Q61216 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.24■□□□□ 0.03
Mre11Q61216 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.24■□□□□ 0.03
Mre11Q61216 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Mre11Q61216 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Mre11Q61216 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mre11Q61216 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mre11Q61216 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.23■□□□□ 0.03
Mre11Q61216 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.23■□□□□ 0.03
Mre11Q61216 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.23■□□□□ 0.03
Mre11Q61216 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.23■□□□□ 0.03
Mre11Q61216 Shd-206ENSMUST00000225145 998 ntBASIC15.23■□□□□ 0.03
Mre11Q61216 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.23■□□□□ 0.03
Mre11Q61216 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mre11Q61216 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.23■□□□□ 0.03
Mre11Q61216 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.23■□□□□ 0.03
Mre11Q61216 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mre11Q61216 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Mre11Q61216 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
Mre11Q61216 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.22■□□□□ 0.03
Mre11Q61216 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC15.22■□□□□ 0.03
Mre11Q61216 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.22■□□□□ 0.03
Mre11Q61216 Gm18889-201ENSMUST00000174284 929 ntBASIC15.22■□□□□ 0.03
Mre11Q61216 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Mre11Q61216 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mre11Q61216 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms