Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm45575-201ENSMUST00000210283 548 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.21□□□□□ -0.45
Col12a1Q60847 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.21□□□□□ -0.45
Col12a1Q60847 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col12a1Q60847 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.21□□□□□ -0.45
Col12a1Q60847 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.21□□□□□ -0.45
Col12a1Q60847 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col12a1Q60847 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.21□□□□□ -0.45
Col12a1Q60847 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Col12a1Q60847 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col12a1Q60847 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Col12a1Q60847 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.21□□□□□ -0.46
Col12a1Q60847 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.21□□□□□ -0.46
Col12a1Q60847 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col12a1Q60847 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm12579-201ENSMUST00000118040 783 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.2□□□□□ -0.46
Col12a1Q60847 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm28686-201ENSMUST00000187404 609 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm18776-201ENSMUST00000188833 654 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm5700-201ENSMUST00000191483 989 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm19931-201ENSMUST00000198920 368 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm7238-201ENSMUST00000206467 973 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col12a1Q60847 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.2□□□□□ -0.46
Col12a1Q60847 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.19□□□□□ -0.46
Col12a1Q60847 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm44647-201ENSMUST00000207402 428 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.19□□□□□ -0.46
Col12a1Q60847 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms