Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm12390-201ENSMUST00000117897 397 ntBASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm17150-201ENSMUST00000165577 381 ntBASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm32025-201ENSMUST00000217960 307 ntBASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Gm43417-201ENSMUST00000201586 5207 ntBASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Gm1335-201ENSMUST00000121653 386 ntBASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Gm27682-201ENSMUST00000183930 110 ntBASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Gm26035-201ENSMUST00000083065 308 ntBASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf20Q5DTM8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Gm24526-201ENSMUST00000082921 158 ntBASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf20Q5DTM8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.1■□□□□ 0.01
Rnf20Q5DTM8 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms