Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm15824-201ENSMUST00000119516 955 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm28693-202ENSMUST00000190758 331 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm44124-201ENSMUST00000204159 472 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm5035-201ENSMUST00000215581 927 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm16372-201ENSMUST00000073088 450 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.56□□□□□ -0.4
Scn2bQ56A07 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm13612-201ENSMUST00000119276 390 ntBASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.55□□□□□ -0.4
Scn2bQ56A07 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.55□□□□□ -0.4
Scn2bQ56A07 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn2bQ56A07 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm11814-201ENSMUST00000119515 929 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms