Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm29199-201ENSMUST00000187766 775 ntBASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm8885-201ENSMUST00000189382 598 ntBASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm15703-201ENSMUST00000120250 880 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm15547-201ENSMUST00000122152 333 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm24845-201ENSMUST00000158034 109 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 AA914427-201ENSMUST00000193194 1166 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm38317-201ENSMUST00000195564 343 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h1Q4VGL6 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm2383-201ENSMUST00000181461 807 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm42660-201ENSMUST00000197733 947 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h1Q4VGL6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms