Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.22■□□□□ 0.19
Ccdc27Q3V036 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Gm5687-201ENSMUST00000118252 640 ntBASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Gm25927-201ENSMUST00000175058 117 ntBASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Ccdc27Q3V036 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.21■□□□□ 0.18
Ccdc27Q3V036 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.21■□□□□ 0.18
Ccdc27Q3V036 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16.21■□□□□ 0.18
Ccdc27Q3V036 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc27Q3V036 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Gm38114-201ENSMUST00000191877 1232 ntBASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Gm45668-201ENSMUST00000211271 493 ntBASIC16.2■□□□□ 0.18
Ccdc27Q3V036 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc27Q3V036 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms