Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Gm15547-201ENSMUST00000122152 333 ntBASIC15.14■□□□□ 0.01
SfswapQ3USH5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.14■□□□□ 0.01
SfswapQ3USH5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.14■□□□□ 0.01
SfswapQ3USH5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SfswapQ3USH5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm11930-201ENSMUST00000117788 190 ntBASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm12997-201ENSMUST00000120207 640 ntBASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.13■□□□□ 0.01
SfswapQ3USH5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm8018-201ENSMUST00000173536 789 ntBASIC15.13■□□□□ 0.01
SfswapQ3USH5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SfswapQ3USH5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gm27046-201ENSMUST00000182160 463 ntBASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.12■□□□□ 0.01
SfswapQ3USH5 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.12■□□□□ 0.01
SfswapQ3USH5 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms