Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.09□□□□□ -0.95
Cks1brtQ3UNC9 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.96
Cks1brtQ3UNC9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.09□□□□□ -0.96
Cks1brtQ3UNC9 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1brtQ3UNC9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms