Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm25766-201ENSMUST00000104101 131 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm15620-201ENSMUST00000122949 270 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm24943-201ENSMUST00000158329 433 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm42937-201ENSMUST00000197360 752 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gm38007-201ENSMUST00000192187 313 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gm18514-201ENSMUST00000218980 436 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Mir326-201ENSMUST00000083637 95 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Spg11Q3UHA3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm24398-201ENSMUST00000157870 109 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms