Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.96□□□□□ -0.01
Limch1Q3UH68 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Limch1Q3UH68 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Limch1Q3UH68 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Limch1Q3UH68 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Limch1Q3UH68 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.96□□□□□ -0.02
Limch1Q3UH68 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm11793-201ENSMUST00000120433 981 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm13342-201ENSMUST00000121055 207 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm7029-201ENSMUST00000173226 450 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm25927-201ENSMUST00000175058 117 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.95□□□□□ -0.02
Limch1Q3UH68 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm10146-201ENSMUST00000072739 309 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.95□□□□□ -0.02
Limch1Q3UH68 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.95□□□□□ -0.02
Limch1Q3UH68 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gm44364-201ENSMUST00000198368 141 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gm18935-201ENSMUST00000212692 664 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gm24526-201ENSMUST00000082921 158 ntBASIC14.94□□□□□ -0.02
Limch1Q3UH68 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Limch1Q3UH68 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.93□□□□□ -0.02
Limch1Q3UH68 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.93□□□□□ -0.02
Limch1Q3UH68 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limch1Q3UH68 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms