Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.05□□□□□ -0.64
Q3U1D9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Gm8018-201ENSMUST00000173536 789 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.05□□□□□ -0.64
Q3U1D9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Q3U1D9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.05□□□□□ -0.64
Q3U1D9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Gm18056-201ENSMUST00000207670 568 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm18061-201ENSMUST00000208350 562 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm18063-201ENSMUST00000208529 568 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm18052-201ENSMUST00000208750 559 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm5950-201ENSMUST00000213337 772 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.05□□□□□ -0.64
Q3U1D9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Q3U1D9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.05□□□□□ -0.64
Q3U1D9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.04□□□□□ -0.64
Q3U1D9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.04□□□□□ -0.64
Q3U1D9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Q3U1D9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.04□□□□□ -0.64
Q3U1D9 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.04□□□□□ -0.64
Q3U1D9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.04□□□□□ -0.64
Q3U1D9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.04□□□□□ -0.64
Q3U1D9 Mir433-201ENSMUST00000093564 124 ntBASIC11.04□□□□□ -0.64
Q3U1D9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.04□□□□□ -0.64
Q3U1D9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Q3U1D9 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.03□□□□□ -0.64
Q3U1D9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.03□□□□□ -0.64
Q3U1D9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Q3U1D9 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.03□□□□□ -0.64
Q3U1D9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Q3U1D9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Q3U1D9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Q3U1D9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Q3U1D9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Q3U1D9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Q3U1D9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.03□□□□□ -0.64
Q3U1D9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.03□□□□□ -0.64
Q3U1D9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Q3U1D9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms