Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ptchd3Q0EEE2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ptchd3Q0EEE2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.25□□□□□ -0.45
Ptchd3Q0EEE2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms