Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm18062-201ENSMUST00000208020 547 ntBASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm18055-201ENSMUST00000208254 547 ntBASIC11.17□□□□□ -0.62
Thbs3Q05895 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.17□□□□□ -0.62
Thbs3Q05895 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.17□□□□□ -0.62
Thbs3Q05895 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Thbs3Q05895 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.16□□□□□ -0.62
Thbs3Q05895 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.16□□□□□ -0.62
Thbs3Q05895 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Thbs3Q05895 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Gm16296-201ENSMUST00000159905 325 ntBASIC11.16□□□□□ -0.62
Thbs3Q05895 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Thbs3Q05895 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Snora73a-201ENSMUST00000082453 205 ntBASIC11.16□□□□□ -0.62
Thbs3Q05895 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Thbs3Q05895 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.16□□□□□ -0.62
Thbs3Q05895 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thbs3Q05895 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.16□□□□□ -0.62
Thbs3Q05895 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Thbs3Q05895 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Gm11591-201ENSMUST00000120063 702 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Gm38092-201ENSMUST00000195600 653 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.15□□□□□ -0.62
Thbs3Q05895 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thbs3Q05895 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.15□□□□□ -0.62
Thbs3Q05895 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Thbs3Q05895 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms