Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm14234-201ENSMUST00000119539 845 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm12978-201ENSMUST00000121250 522 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm4207-201ENSMUST00000173144 960 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm29304-201ENSMUST00000186555 695 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm29223-201ENSMUST00000188867 695 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm37201-201ENSMUST00000191845 523 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Trbv27-201ENSMUST00000193711 277 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm37921-201ENSMUST00000194333 695 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm18382-201ENSMUST00000194394 582 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm42657-201ENSMUST00000201746 211 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm45401-201ENSMUST00000209456 733 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 AC122924.1-201ENSMUST00000222044 163 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.65□□□□□ -0.38
Col9a1Q05722 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 AC115784.1-201ENSMUST00000227687 1010 ntBASIC12.65□□□□□ -0.38
Col9a1Q05722 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col9a1Q05722 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col9a1Q05722 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Col9a1Q05722 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Col9a1Q05722 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col9a1Q05722 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.64□□□□□ -0.39
Col9a1Q05722 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC12.64□□□□□ -0.39
Col9a1Q05722 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.64□□□□□ -0.39
Col9a1Q05722 AC156574.1-201ENSMUST00000227084 452 ntBASIC12.64□□□□□ -0.39
Col9a1Q05722 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Gm42975-201ENSMUST00000200612 1491 ntBASIC12.64□□□□□ -0.39
Col9a1Q05722 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Col9a1Q05722 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col9a1Q05722 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col9a1Q05722 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm18300-201ENSMUST00000192792 1406 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms