Protein–RNA interactions for Protein: Q04891

Sox13, Transcription factor SOX-13, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox13Q04891 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sox13Q04891 Mir686-201ENSMUST00000102174 109 ntBASIC13.06□□□□□ -0.32
Sox13Q04891 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sox13Q04891 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Gm7774-201ENSMUST00000200064 533 ntBASIC13.06□□□□□ -0.32
Sox13Q04891 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Sox13Q04891 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.06□□□□□ -0.32
Sox13Q04891 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.06□□□□□ -0.32
Sox13Q04891 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.06□□□□□ -0.32
Sox13Q04891 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sox13Q04891 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox13Q04891 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox13Q04891 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox13Q04891 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sox13Q04891 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.05□□□□□ -0.32
Sox13Q04891 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox13Q04891 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Gm25911-201ENSMUST00000157621 56 ntBASIC13.05□□□□□ -0.32
Sox13Q04891 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox13Q04891 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox13Q04891 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.05□□□□□ -0.32
Sox13Q04891 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sox13Q04891 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
Sox13Q04891 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox13Q04891 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox13Q04891 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Sox13Q04891 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.04□□□□□ -0.32
Sox13Q04891 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Sox13Q04891 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.04□□□□□ -0.32
Sox13Q04891 Gm44344-201ENSMUST00000200287 129 ntBASIC13.04□□□□□ -0.32
Sox13Q04891 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox13Q04891 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox13Q04891 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.04□□□□□ -0.32
Sox13Q04891 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox13Q04891 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox13Q04891 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sox13Q04891 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox13Q04891 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox13Q04891 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Sox13Q04891 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms