Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a1Q04857 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a1Q04857 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a1Q04857 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm9062-201ENSMUST00000117712 727 ntBASIC14.04□□□□□ -0.16
Col6a1Q04857 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm44651-201ENSMUST00000207343 372 ntBASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm7848-201ENSMUST00000210739 718 ntBASIC14.04□□□□□ -0.16
Col6a1Q04857 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a1Q04857 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.04□□□□□ -0.16
Col6a1Q04857 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a1Q04857 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.04□□□□□ -0.16
Col6a1Q04857 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a1Q04857 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a1Q04857 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm15131-201ENSMUST00000119124 595 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm12266-201ENSMUST00000120311 962 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col6a1Q04857 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm45224-201ENSMUST00000208203 414 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm10752-201ENSMUST00000218348 729 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.03□□□□□ -0.16
Col6a1Q04857 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a1Q04857 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a1Q04857 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a1Q04857 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a1Q04857 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Col6a1Q04857 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a1Q04857 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.02□□□□□ -0.16
Col6a1Q04857 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a1Q04857 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col6a1Q04857 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a1Q04857 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a1Q04857 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col6a1Q04857 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm12058-201ENSMUST00000118614 437 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm13408-201ENSMUST00000119822 798 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm13935-201ENSMUST00000121859 798 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms