Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm12138-201ENSMUST00000122180 951 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm27847-201ENSMUST00000183711 107 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm27375-201ENSMUST00000183799 107 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gm10012-201ENSMUST00000078252 192 ntBASIC12.78□□□□□ -0.36
Pfdn6Q03958 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn6Q03958 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm12203-201ENSMUST00000118235 598 ntBASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm12209-201ENSMUST00000120089 596 ntBASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm23363-201ENSMUST00000175024 79 ntBASIC12.77□□□□□ -0.37
Pfdn6Q03958 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.77□□□□□ -0.37
Pfdn6Q03958 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.77□□□□□ -0.37
Pfdn6Q03958 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn6Q03958 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pfdn6Q03958 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.76□□□□□ -0.37
Pfdn6Q03958 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn6Q03958 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms