Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Gm13296-201ENSMUST00000117854 997 ntBASIC10.85□□□□□ -0.67
Col8a1Q00780 Gm12266-201ENSMUST00000120311 962 ntBASIC10.85□□□□□ -0.67
Col8a1Q00780 Gm15432-201ENSMUST00000121106 195 ntBASIC10.85□□□□□ -0.67
Col8a1Q00780 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.85□□□□□ -0.67
Col8a1Q00780 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.85□□□□□ -0.67
Col8a1Q00780 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Col8a1Q00780 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Col8a1Q00780 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.84□□□□□ -0.67
Col8a1Q00780 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Daam2-202ENSMUST00000224595 1926 ntBASIC10.84□□□□□ -0.67
Col8a1Q00780 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.84□□□□□ -0.67
Col8a1Q00780 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.84□□□□□ -0.67
Col8a1Q00780 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col8a1Q00780 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a1Q00780 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Col8a1Q00780 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.83□□□□□ -0.68
Col8a1Q00780 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.83□□□□□ -0.68
Col8a1Q00780 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.83□□□□□ -0.68
Col8a1Q00780 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a1Q00780 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.83□□□□□ -0.68
Col8a1Q00780 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms