Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Gm14350-201ENSMUST00000116642 640 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Gm12151-201ENSMUST00000121374 290 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smn1P97801 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Gm27838-201ENSMUST00000184829 128 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.88□□□□□ -0.67
Smn1P97801 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Gm7730-201ENSMUST00000212486 454 ntBASIC10.88□□□□□ -0.67
Smn1P97801 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.88□□□□□ -0.67
Smn1P97801 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Smn1P97801 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Smn1P97801 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Smn1P97801 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smn1P97801 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.88□□□□□ -0.67
Smn1P97801 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smn1P97801 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.88□□□□□ -0.67
Smn1P97801 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.87□□□□□ -0.67
Smn1P97801 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Gm16202-201ENSMUST00000117532 544 ntBASIC10.87□□□□□ -0.67
Smn1P97801 Gm13813-201ENSMUST00000120998 787 ntBASIC10.87□□□□□ -0.67
Smn1P97801 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.87□□□□□ -0.67
Smn1P97801 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.87□□□□□ -0.67
Smn1P97801 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.87□□□□□ -0.67
Smn1P97801 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Smn1P97801 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.87□□□□□ -0.67
Smn1P97801 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.87□□□□□ -0.67
Smn1P97801 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Smn1P97801 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.87□□□□□ -0.67
Smn1P97801 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smn1P97801 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smn1P97801 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Smn1P97801 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.86□□□□□ -0.67
Smn1P97801 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smn1P97801 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smn1P97801 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.86□□□□□ -0.67
Smn1P97801 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smn1P97801 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Smn1P97801 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Smn1P97801 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.86□□□□□ -0.67
Smn1P97801 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.86□□□□□ -0.67
Smn1P97801 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.86□□□□□ -0.67
Smn1P97801 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smn1P97801 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms