Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.68□□□□□ -0.7
Npas1P97459 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.68□□□□□ -0.7
Npas1P97459 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.68□□□□□ -0.7
Npas1P97459 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.68□□□□□ -0.7
Npas1P97459 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Npas1P97459 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Npas1P97459 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Npas1P97459 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Npas1P97459 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.67□□□□□ -0.7
Npas1P97459 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.67□□□□□ -0.7
Npas1P97459 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Npas1P97459 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.67□□□□□ -0.7
Npas1P97459 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Npas1P97459 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.67□□□□□ -0.7
Npas1P97459 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.67□□□□□ -0.7
Npas1P97459 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.67□□□□□ -0.7
Npas1P97459 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Npas1P97459 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.67□□□□□ -0.7
Npas1P97459 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.67□□□□□ -0.7
Npas1P97459 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.67□□□□□ -0.7
Npas1P97459 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.67□□□□□ -0.7
Npas1P97459 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Npas1P97459 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Npas1P97459 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.66□□□□□ -0.7
Npas1P97459 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Npas1P97459 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.66□□□□□ -0.7
Npas1P97459 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Npas1P97459 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.66□□□□□ -0.7
Npas1P97459 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.66□□□□□ -0.7
Npas1P97459 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Npas1P97459 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.66□□□□□ -0.7
Npas1P97459 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.66□□□□□ -0.7
Npas1P97459 Gm44344-201ENSMUST00000200287 129 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms