Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
H3f3aP84244 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.32□□□□□ -0.6
H3f3aP84244 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3aP84244 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.32□□□□□ -0.6
H3f3aP84244 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm37008-201ENSMUST00000195712 319 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 Gm19184-201ENSMUST00000196798 928 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3aP84244 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
H3f3aP84244 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.32□□□□□ -0.6
H3f3aP84244 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
H3f3aP84244 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3aP84244 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.32□□□□□ -0.6
H3f3aP84244 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3aP84244 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
H3f3aP84244 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.31□□□□□ -0.6
H3f3aP84244 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.31□□□□□ -0.6
H3f3aP84244 Gm13492-201ENSMUST00000119772 665 ntBASIC11.31□□□□□ -0.6
H3f3aP84244 Gm15703-201ENSMUST00000120250 880 ntBASIC11.31□□□□□ -0.6
H3f3aP84244 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.31□□□□□ -0.6
H3f3aP84244 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm5781-201ENSMUST00000219792 443 ntBASIC11.31□□□□□ -0.6
H3f3aP84244 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.31□□□□□ -0.6
H3f3aP84244 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
H3f3aP84244 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.31□□□□□ -0.6
H3f3aP84244 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3aP84244 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms