Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
SgcaP82350 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SgcaP82350 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Gm22065-201ENSMUST00000103753 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm22066-201ENSMUST00000103761 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24932-201ENSMUST00000103763 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24115-201ENSMUST00000103799 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm22190-201ENSMUST00000103827 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm22191-201ENSMUST00000103831 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24721-201ENSMUST00000103849 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm28018-201ENSMUST00000103869 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm26399-201ENSMUST00000103937 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SgcaP82350 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.66□□□□□ -0.7
SgcaP82350 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Gm25349-201ENSMUST00000177728 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm23616-201ENSMUST00000177797 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm25871-201ENSMUST00000177816 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24752-201ENSMUST00000178240 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24496-201ENSMUST00000178287 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm25649-201ENSMUST00000178476 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm25548-201ENSMUST00000178681 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm23147-201ENSMUST00000178841 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm26095-201ENSMUST00000179270 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm22171-201ENSMUST00000179283 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm23936-201ENSMUST00000179354 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm22619-201ENSMUST00000179516 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm25255-201ENSMUST00000179579 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24755-201ENSMUST00000179691 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm26506-201ENSMUST00000179692 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm25086-201ENSMUST00000179931 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm23243-201ENSMUST00000180047 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24659-201ENSMUST00000180212 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm24169-201ENSMUST00000180244 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm23689-201ENSMUST00000180354 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm27622-201ENSMUST00000183779 60 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm27359-201ENSMUST00000184153 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm27785-201ENSMUST00000184268 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm27466-201ENSMUST00000184396 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm27703-201ENSMUST00000184836 110 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Gm27397-201ENSMUST00000184997 107 ntBASIC10.66□□□□□ -0.7
SgcaP82350 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SgcaP82350 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcaP82350 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.66□□□□□ -0.7
SgcaP82350 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcaP82350 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SgcaP82350 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.66□□□□□ -0.7
SgcaP82350 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SgcaP82350 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.65□□□□□ -0.7
SgcaP82350 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.65□□□□□ -0.7
SgcaP82350 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.65□□□□□ -0.7
SgcaP82350 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.65□□□□□ -0.7
SgcaP82350 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.65□□□□□ -0.7
SgcaP82350 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.65□□□□□ -0.7
SgcaP82350 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.65□□□□□ -0.7
SgcaP82350 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SgcaP82350 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SgcaP82350 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SgcaP82350 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms