Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Gm24255-201ENSMUST00000104481 128 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Lhx1P63006 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Gm27320-201ENSMUST00000184892 109 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.48□□□□□ -0.41
Lhx1P63006 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lhx1P63006 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.47□□□□□ -0.41
Lhx1P63006 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Lhx1P63006 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lhx1P63006 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Lhx1P63006 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm20482-202ENSMUST00000174729 825 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 Gm31256-201ENSMUST00000194705 506 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm5950-201ENSMUST00000213337 772 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.47□□□□□ -0.41
Lhx1P63006 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.47□□□□□ -0.41
Lhx1P63006 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lhx1P63006 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx1P63006 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.46□□□□□ -0.41
Lhx1P63006 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx1P63006 Rmrp-201ENSMUST00000157463 271 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms