Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
Tpm2P58774 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.62□□□□□ -0.07
Tpm2P58774 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.62□□□□□ -0.07
Tpm2P58774 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.62□□□□□ -0.07
Tpm2P58774 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.62□□□□□ -0.07
Tpm2P58774 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm2P58774 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm2P58774 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Tpm2P58774 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Tpm2P58774 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.61□□□□□ -0.07
Tpm2P58774 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Tpm2P58774 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm2P58774 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.61□□□□□ -0.07
Tpm2P58774 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm19931-201ENSMUST00000198920 368 ntBASIC14.61□□□□□ -0.07
Tpm2P58774 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm5161-201ENSMUST00000075243 853 ntBASIC14.61□□□□□ -0.07
Tpm2P58774 Gm24447-201ENSMUST00000083977 338 ntBASIC14.61□□□□□ -0.07
Tpm2P58774 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.61□□□□□ -0.07
Tpm2P58774 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tpm2P58774 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tpm2P58774 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tpm2P58774 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Tpm2P58774 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm2P58774 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Tpm2P58774 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.61□□□□□ -0.07
Tpm2P58774 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Gm10548-201ENSMUST00000097631 2629 ntBASIC14.6□□□□□ -0.07
Tpm2P58774 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Gm13223-201ENSMUST00000118609 747 ntBASIC14.6□□□□□ -0.07
Tpm2P58774 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.6□□□□□ -0.07
Tpm2P58774 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.6□□□□□ -0.07
Tpm2P58774 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Tpm2P58774 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tpm2P58774 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.6□□□□□ -0.07
Tpm2P58774 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.6□□□□□ -0.07
Tpm2P58774 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Tpm2P58774 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm2P58774 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.6□□□□□ -0.07
Tpm2P58774 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms