Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.15□□□□□ -0.46
Cdkn2bP55271 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Gm8805-201ENSMUST00000117848 313 ntBASIC12.15□□□□□ -0.46
Cdkn2bP55271 Gm15703-201ENSMUST00000120250 880 ntBASIC12.15□□□□□ -0.46
Cdkn2bP55271 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Gm8099-201ENSMUST00000200510 742 ntBASIC12.15□□□□□ -0.46
Cdkn2bP55271 Gm8227-201ENSMUST00000223306 571 ntBASIC12.15□□□□□ -0.46
Cdkn2bP55271 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.15□□□□□ -0.46
Cdkn2bP55271 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdkn2bP55271 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdkn2bP55271 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.15□□□□□ -0.47
Cdkn2bP55271 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Cdkn2bP55271 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.14□□□□□ -0.47
Cdkn2bP55271 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.14□□□□□ -0.47
Cdkn2bP55271 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm12859-201ENSMUST00000117834 427 ntBASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm13612-201ENSMUST00000119276 390 ntBASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm23363-201ENSMUST00000175024 79 ntBASIC12.14□□□□□ -0.47
Cdkn2bP55271 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm15823-201ENSMUST00000064305 670 ntBASIC12.14□□□□□ -0.47
Cdkn2bP55271 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdkn2bP55271 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Snord83b-201ENSMUST00000104546 94 ntBASIC12.13□□□□□ -0.47
Cdkn2bP55271 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Proscos-202ENSMUST00000178990 666 ntBASIC12.13□□□□□ -0.47
Cdkn2bP55271 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.13□□□□□ -0.47
Cdkn2bP55271 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms