Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm13408-201ENSMUST00000119822 798 ntBASIC16.01■□□□□ 0.15
Msh6P54276 Gm13935-201ENSMUST00000121859 798 ntBASIC16.01■□□□□ 0.15
Msh6P54276 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.01■□□□□ 0.15
Msh6P54276 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.01■□□□□ 0.15
Msh6P54276 Gm42937-201ENSMUST00000197360 752 ntBASIC16.01■□□□□ 0.15
Msh6P54276 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh6P54276 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh6P54276 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh6P54276 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Msh6P54276 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.01■□□□□ 0.15
Msh6P54276 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Gm28882-201ENSMUST00000185504 314 ntBASIC16■□□□□ 0.15
Msh6P54276 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Gm44545-201ENSMUST00000208262 746 ntBASIC16■□□□□ 0.15
Msh6P54276 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16■□□□□ 0.15
Msh6P54276 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Gm43045-201ENSMUST00000198725 2095 ntBASIC16■□□□□ 0.15
Msh6P54276 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16■□□□□ 0.15
Msh6P54276 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16■□□□□ 0.15
Msh6P54276 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16■□□□□ 0.15
Msh6P54276 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Gm14644-201ENSMUST00000116671 647 ntBASIC16■□□□□ 0.15
Msh6P54276 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Msh6P54276 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16■□□□□ 0.15
Msh6P54276 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC16■□□□□ 0.15
Msh6P54276 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16■□□□□ 0.15
Msh6P54276 Gm8285-201ENSMUST00000208293 759 ntBASIC16■□□□□ 0.15
Msh6P54276 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16■□□□□ 0.15
Msh6P54276 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16■□□□□ 0.15
Msh6P54276 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Msh6P54276 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Msh6P54276 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Msh6P54276 Gm24231-201ENSMUST00000104315 133 ntBASIC15.99■□□□□ 0.15
Msh6P54276 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.99■□□□□ 0.15
Msh6P54276 Gm27438-201ENSMUST00000183480 110 ntBASIC15.99■□□□□ 0.15
Msh6P54276 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.99■□□□□ 0.15
Msh6P54276 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.99■□□□□ 0.15
Msh6P54276 Gm26035-201ENSMUST00000083065 308 ntBASIC15.99■□□□□ 0.15
Msh6P54276 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Msh6P54276 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.98■□□□□ 0.15
Msh6P54276 Acot6-202ENSMUST00000222921 3622 ntBASIC15.98■□□□□ 0.15
Msh6P54276 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Msh6P54276 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms