Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pdx1P52946 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.56□□□□□ -0.4
Pdx1P52946 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.56□□□□□ -0.4
Pdx1P52946 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm16379-201ENSMUST00000161469 348 ntBASIC12.56□□□□□ -0.4
Pdx1P52946 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.56□□□□□ -0.4
Pdx1P52946 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm8762-201ENSMUST00000193486 339 ntBASIC12.56□□□□□ -0.4
Pdx1P52946 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.56□□□□□ -0.4
Pdx1P52946 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdx1P52946 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdx1P52946 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdx1P52946 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Pdx1P52946 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.55□□□□□ -0.4
Pdx1P52946 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.55□□□□□ -0.4
Pdx1P52946 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdx1P52946 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdx1P52946 Gm19184-201ENSMUST00000196798 928 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.55□□□□□ -0.4
Pdx1P52946 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdx1P52946 Gm24526-201ENSMUST00000082921 158 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdx1P52946 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pdx1P52946 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.55□□□□□ -0.4
Pdx1P52946 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pdx1P52946 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pdx1P52946 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pdx1P52946 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdx1P52946 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pdx1P52946 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdx1P52946 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Pdx1P52946 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms