Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ClgnP52194 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ClgnP52194 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ClgnP52194 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.99□□□□□ -0.33
ClgnP52194 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ClgnP52194 Gm11637-201ENSMUST00000120601 592 ntBASIC12.99□□□□□ -0.33
ClgnP52194 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
ClgnP52194 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ClgnP52194 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.99□□□□□ -0.33
ClgnP52194 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.99□□□□□ -0.33
ClgnP52194 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.99□□□□□ -0.33
ClgnP52194 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.99□□□□□ -0.33
ClgnP52194 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.99□□□□□ -0.33
ClgnP52194 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ClgnP52194 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
ClgnP52194 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.99□□□□□ -0.33
ClgnP52194 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
ClgnP52194 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ClgnP52194 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClgnP52194 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.98□□□□□ -0.33
ClgnP52194 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClgnP52194 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ClgnP52194 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.98□□□□□ -0.33
ClgnP52194 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClgnP52194 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.98□□□□□ -0.33
ClgnP52194 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.98□□□□□ -0.33
ClgnP52194 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ClgnP52194 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClgnP52194 Gm7063-201ENSMUST00000186840 981 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Gm8598-201ENSMUST00000221184 836 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ClgnP52194 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
ClgnP52194 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.98□□□□□ -0.33
ClgnP52194 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.98□□□□□ -0.33
ClgnP52194 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ClgnP52194 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.98□□□□□ -0.33
ClgnP52194 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.97□□□□□ -0.33
ClgnP52194 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClgnP52194 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.97□□□□□ -0.33
ClgnP52194 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms