Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Lhx3P50481 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Gm11222-201ENSMUST00000119005 738 ntBASIC12.85□□□□□ -0.35
Lhx3P50481 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Lhx3P50481 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.85□□□□□ -0.35
Lhx3P50481 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.85□□□□□ -0.35
Lhx3P50481 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx3P50481 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.84□□□□□ -0.35
Lhx3P50481 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lhx3P50481 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.84□□□□□ -0.35
Lhx3P50481 Gm14999-201ENSMUST00000121039 624 ntBASIC12.84□□□□□ -0.35
Lhx3P50481 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.84□□□□□ -0.35
Lhx3P50481 Gm9022-201ENSMUST00000182482 992 ntBASIC12.84□□□□□ -0.35
Lhx3P50481 Gm27243-201ENSMUST00000183964 521 ntBASIC12.84□□□□□ -0.35
Lhx3P50481 Gm44364-201ENSMUST00000198368 141 ntBASIC12.84□□□□□ -0.35
Lhx3P50481 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lhx3P50481 Gm7783-201ENSMUST00000204795 781 ntBASIC12.84□□□□□ -0.35
Lhx3P50481 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.84□□□□□ -0.35
Lhx3P50481 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Lhx3P50481 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lhx3P50481 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lhx3P50481 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lhx3P50481 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lhx3P50481 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Lhx3P50481 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Gm7584-201ENSMUST00000175829 940 ntBASIC12.83□□□□□ -0.36
Lhx3P50481 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms