Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.22□□□□□ -0.45
Prox1P48437 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Gm26464-201ENSMUST00000157094 305 ntBASIC12.22□□□□□ -0.45
Prox1P48437 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.22□□□□□ -0.45
Prox1P48437 Gm19078-201ENSMUST00000206311 727 ntBASIC12.22□□□□□ -0.45
Prox1P48437 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.22□□□□□ -0.45
Prox1P48437 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Prox1P48437 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Prox1P48437 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.21□□□□□ -0.45
Prox1P48437 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.21□□□□□ -0.45
Prox1P48437 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Prox1P48437 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.21□□□□□ -0.45
Prox1P48437 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Prox1P48437 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Gm21854-201ENSMUST00000179901 471 ntBASIC12.21□□□□□ -0.45
Prox1P48437 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Gm29608-201ENSMUST00000190444 463 ntBASIC12.21□□□□□ -0.45
Prox1P48437 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.21□□□□□ -0.45
Prox1P48437 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Gm9797-201ENSMUST00000052902 613 ntBASIC12.21□□□□□ -0.45
Prox1P48437 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Prox1P48437 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prox1P48437 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.21□□□□□ -0.46
Prox1P48437 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Prox1P48437 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.21□□□□□ -0.46
Prox1P48437 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.21□□□□□ -0.46
Prox1P48437 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.21□□□□□ -0.46
Prox1P48437 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.21□□□□□ -0.46
Prox1P48437 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prox1P48437 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.2□□□□□ -0.46
Prox1P48437 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prox1P48437 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.2□□□□□ -0.46
Prox1P48437 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Prox1P48437 Gm15376-201ENSMUST00000122258 783 ntBASIC12.2□□□□□ -0.46
Prox1P48437 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms