Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox6P40645 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.95□□□□□ -0.5
Sox6P40645 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox6P40645 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox6P40645 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.95□□□□□ -0.5
Sox6P40645 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.95□□□□□ -0.5
Sox6P40645 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sox6P40645 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox6P40645 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Sox6P40645 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Sox6P40645 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox6P40645 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox6P40645 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm11478-201ENSMUST00000117851 599 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Gm11424-201ENSMUST00000121929 829 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox6P40645 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox6P40645 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm7653-201ENSMUST00000214567 508 ntBASIC11.94□□□□□ -0.5
Sox6P40645 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Itm2b-204ENSMUST00000228637 783 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox6P40645 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox6P40645 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Sox6P40645 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox6P40645 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox6P40645 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.94□□□□□ -0.5
Sox6P40645 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox6P40645 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox6P40645 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sox6P40645 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox6P40645 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox6P40645 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Gm12138-201ENSMUST00000122180 951 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox6P40645 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox6P40645 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Gm9002-201ENSMUST00000178437 499 ntBASIC11.93□□□□□ -0.5
Sox6P40645 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms