Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm17889-201ENSMUST00000198410 598 ntBASIC13.02□□□□□ -0.33
Cxcl12P40224 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.02□□□□□ -0.33
Cxcl12P40224 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Gm25517-201ENSMUST00000083865 134 ntBASIC13.02□□□□□ -0.33
Cxcl12P40224 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.02□□□□□ -0.33
Cxcl12P40224 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.02□□□□□ -0.33
Cxcl12P40224 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cxcl12P40224 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cxcl12P40224 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.01□□□□□ -0.33
Cxcl12P40224 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm12516-201ENSMUST00000120819 385 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm11246-201ENSMUST00000120880 345 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Mir1901-201ENSMUST00000122616 78 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cxcl12P40224 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm8100-201ENSMUST00000182906 988 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm3332-201ENSMUST00000189337 928 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm37028-201ENSMUST00000194276 107 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.01□□□□□ -0.33
Cxcl12P40224 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm2517-201ENSMUST00000215651 348 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Snora73b-201ENSMUST00000083419 205 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.01□□□□□ -0.33
Cxcl12P40224 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cxcl12P40224 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl12P40224 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13□□□□□ -0.33
Cxcl12P40224 Gm13809-201ENSMUST00000117921 597 ntBASIC13□□□□□ -0.33
Cxcl12P40224 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13□□□□□ -0.33
Cxcl12P40224 Gm22138-201ENSMUST00000158748 128 ntBASIC13□□□□□ -0.33
Cxcl12P40224 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cxcl12P40224 Gm17831-201ENSMUST00000205579 900 ntBASIC13□□□□□ -0.33
Cxcl12P40224 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl12P40224 Gm10288-201ENSMUST00000084614 537 ntBASIC13□□□□□ -0.33
Cxcl12P40224 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms