Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Fen1P39749 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.8□□□□□ -0.36
Fen1P39749 Gm6447-201ENSMUST00000118905 835 ntBASIC12.8□□□□□ -0.36
Fen1P39749 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.8□□□□□ -0.36
Fen1P39749 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.8□□□□□ -0.36
Fen1P39749 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.8□□□□□ -0.36
Fen1P39749 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.8□□□□□ -0.36
Fen1P39749 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Gm26464-201ENSMUST00000157094 305 ntBASIC12.8□□□□□ -0.36
Fen1P39749 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Gm27838-201ENSMUST00000184829 128 ntBASIC12.8□□□□□ -0.36
Fen1P39749 Gm44855-201ENSMUST00000205725 362 ntBASIC12.8□□□□□ -0.36
Fen1P39749 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fen1P39749 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Fen1P39749 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.8□□□□□ -0.36
Fen1P39749 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Fen1P39749 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Fen1P39749 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.79□□□□□ -0.36
Fen1P39749 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fen1P39749 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Fen1P39749 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fen1P39749 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.79□□□□□ -0.36
Fen1P39749 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.79□□□□□ -0.36
Fen1P39749 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.79□□□□□ -0.36
Fen1P39749 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Fen1P39749 Gm15487-201ENSMUST00000122373 465 ntBASIC12.79□□□□□ -0.36
Fen1P39749 Gm42550-201ENSMUST00000201553 960 ntBASIC12.79□□□□□ -0.36
Fen1P39749 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.79□□□□□ -0.36
Fen1P39749 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Fen1P39749 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.79□□□□□ -0.36
Fen1P39749 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fen1P39749 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.78□□□□□ -0.36
Fen1P39749 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.78□□□□□ -0.36
Fen1P39749 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Fen1P39749 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.78□□□□□ -0.36
Fen1P39749 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.78□□□□□ -0.36
Fen1P39749 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Fen1P39749 Gm11524-201ENSMUST00000119349 807 ntBASIC12.78□□□□□ -0.36
Fen1P39749 Gm14719-201ENSMUST00000121891 340 ntBASIC12.78□□□□□ -0.36
Fen1P39749 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.78□□□□□ -0.36
Fen1P39749 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Fen1P39749 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fen1P39749 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms