Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.71□□□□□ -0.53
Nedd8P29595 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nedd8P29595 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.71□□□□□ -0.54
Nedd8P29595 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nedd8P29595 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Nedd8P29595 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nedd8P29595 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.71□□□□□ -0.54
Nedd8P29595 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nedd8P29595 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.71□□□□□ -0.54
Nedd8P29595 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Nedd8P29595 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Nedd8P29595 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nedd8P29595 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Nedd8P29595 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.7□□□□□ -0.54
Nedd8P29595 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.7□□□□□ -0.54
Nedd8P29595 Gm13884-201ENSMUST00000118103 829 ntBASIC11.7□□□□□ -0.54
Nedd8P29595 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nedd8P29595 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.7□□□□□ -0.54
Nedd8P29595 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.7□□□□□ -0.54
Nedd8P29595 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.7□□□□□ -0.54
Nedd8P29595 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nedd8P29595 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Nedd8P29595 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nedd8P29595 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nedd8P29595 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.69□□□□□ -0.54
Nedd8P29595 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.69□□□□□ -0.54
Nedd8P29595 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nedd8P29595 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nedd8P29595 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nedd8P29595 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Nedd8P29595 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nedd8P29595 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.69□□□□□ -0.54
Nedd8P29595 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms