Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.9□□□□□ -0.82
Ccl6P27784 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Gm11814-201ENSMUST00000119515 929 ntBASIC9.9□□□□□ -0.82
Ccl6P27784 Gm16479-201ENSMUST00000121706 932 ntBASIC9.9□□□□□ -0.82
Ccl6P27784 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ccl6P27784 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.9□□□□□ -0.82
Ccl6P27784 Gm26185-201ENSMUST00000157692 266 ntBASIC9.9□□□□□ -0.82
Ccl6P27784 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
Ccl6P27784 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Gm8602-201ENSMUST00000184045 607 ntBASIC9.9□□□□□ -0.82
Ccl6P27784 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.9□□□□□ -0.82
Ccl6P27784 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Ccl6P27784 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl6P27784 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl6P27784 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Ccl6P27784 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl6P27784 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccl6P27784 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Gm27331-201ENSMUST00000183705 60 ntBASIC9.89□□□□□ -0.83
Ccl6P27784 Gm5745-201ENSMUST00000183748 313 ntBASIC9.89□□□□□ -0.83
Ccl6P27784 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Gm29705-201ENSMUST00000212598 474 ntBASIC9.89□□□□□ -0.83
Ccl6P27784 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Ccl6P27784 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.89□□□□□ -0.83
Ccl6P27784 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ccl6P27784 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Ccl6P27784 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.89□□□□□ -0.83
Ccl6P27784 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl6P27784 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.89□□□□□ -0.83
Ccl6P27784 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.88□□□□□ -0.83
Ccl6P27784 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ccl6P27784 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Ccl6P27784 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.88□□□□□ -0.83
Ccl6P27784 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.88□□□□□ -0.83
Ccl6P27784 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Ccl6P27784 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ccl6P27784 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.88□□□□□ -0.83
Ccl6P27784 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ccl6P27784 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms