Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm22918-201ENSMUST00000103855 110 ntBASIC13.23□□□□□ -0.29
H2afxP27661 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.23□□□□□ -0.29
H2afxP27661 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
H2afxP27661 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
H2afxP27661 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
H2afxP27661 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.23□□□□□ -0.29
H2afxP27661 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afxP27661 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
H2afxP27661 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
H2afxP27661 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Gm5864-201ENSMUST00000202263 970 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.22□□□□□ -0.29
H2afxP27661 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afxP27661 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afxP27661 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
H2afxP27661 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H2afxP27661 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afxP27661 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afxP27661 Gm12291-201ENSMUST00000121627 311 ntBASIC13.21□□□□□ -0.29
H2afxP27661 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afxP27661 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afxP27661 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afxP27661 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afxP27661 Mir8117-201ENSMUST00000184773 107 ntBASIC13.21□□□□□ -0.29
H2afxP27661 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afxP27661 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afxP27661 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afxP27661 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H2afxP27661 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afxP27661 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afxP27661 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
H2afxP27661 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.21□□□□□ -0.3
H2afxP27661 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afxP27661 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
H2afxP27661 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afxP27661 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afxP27661 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afxP27661 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.2□□□□□ -0.3
H2afxP27661 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afxP27661 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms