Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.78□□□□□ -0.52
Cd40lgP27548 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cd40lgP27548 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Cd40lgP27548 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cd40lgP27548 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.77□□□□□ -0.52
Cd40lgP27548 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cd40lgP27548 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cd40lgP27548 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cd40lgP27548 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Cd40lgP27548 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.77□□□□□ -0.52
Cd40lgP27548 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cd40lgP27548 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Gm8805-201ENSMUST00000117848 313 ntBASIC11.77□□□□□ -0.53
Cd40lgP27548 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.77□□□□□ -0.53
Cd40lgP27548 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.77□□□□□ -0.53
Cd40lgP27548 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.77□□□□□ -0.53
Cd40lgP27548 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cd40lgP27548 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Snora78-201ENSMUST00000158630 128 ntBASIC11.76□□□□□ -0.53
Cd40lgP27548 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Mir7221-201ENSMUST00000184009 72 ntBASIC11.76□□□□□ -0.53
Cd40lgP27548 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.76□□□□□ -0.53
Cd40lgP27548 Gm10146-201ENSMUST00000072739 309 ntBASIC11.76□□□□□ -0.53
Cd40lgP27548 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Gm10268-201ENSMUST00000085340 555 ntBASIC11.76□□□□□ -0.53
Cd40lgP27548 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.76□□□□□ -0.53
Cd40lgP27548 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cd40lgP27548 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cd40lgP27548 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cd40lgP27548 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cd40lgP27548 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms