Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd48P18181 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd48P18181 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd48P18181 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd48P18181 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd48P18181 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd48P18181 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cd48P18181 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.4□□□□□ -0.58
Cd48P18181 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.4□□□□□ -0.58
Cd48P18181 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Gm12928-201ENSMUST00000117115 573 ntBASIC11.4□□□□□ -0.58
Cd48P18181 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.4□□□□□ -0.58
Cd48P18181 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cd48P18181 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.4□□□□□ -0.58
Cd48P18181 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.4□□□□□ -0.58
Cd48P18181 Gm45668-201ENSMUST00000211271 493 ntBASIC11.4□□□□□ -0.58
Cd48P18181 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.4□□□□□ -0.58
Cd48P18181 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.4□□□□□ -0.58
Cd48P18181 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cd48P18181 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cd48P18181 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cd48P18181 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cd48P18181 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cd48P18181 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cd48P18181 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cd48P18181 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cd48P18181 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.4□□□□□ -0.59
Cd48P18181 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cd48P18181 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.39□□□□□ -0.59
Cd48P18181 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cd48P18181 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cd48P18181 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.39□□□□□ -0.59
Cd48P18181 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Gm27701-201ENSMUST00000184498 110 ntBASIC11.39□□□□□ -0.59
Cd48P18181 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.39□□□□□ -0.59
Cd48P18181 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.39□□□□□ -0.59
Cd48P18181 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cd48P18181 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cd48P18181 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Cd48P18181 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Cd48P18181 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd48P18181 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms