Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.21□□□□□ -0.46
Cntn1P12960 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cntn1P12960 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.2□□□□□ -0.46
Cntn1P12960 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn1P12960 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.2□□□□□ -0.46
Cntn1P12960 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.2□□□□□ -0.46
Cntn1P12960 Gm13492-201ENSMUST00000119772 665 ntBASIC12.2□□□□□ -0.46
Cntn1P12960 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Cntn1P12960 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.2□□□□□ -0.46
Cntn1P12960 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Cntn1P12960 Gm22058-201ENSMUST00000083393 310 ntBASIC12.2□□□□□ -0.46
Cntn1P12960 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn1P12960 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn1P12960 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn1P12960 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn1P12960 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn1P12960 Daam2-202ENSMUST00000224595 1926 ntBASIC12.19□□□□□ -0.46
Cntn1P12960 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cntn1P12960 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Cntn1P12960 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.19□□□□□ -0.46
Cntn1P12960 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.19□□□□□ -0.46
Cntn1P12960 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.19□□□□□ -0.46
Cntn1P12960 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.19□□□□□ -0.46
Cntn1P12960 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm24526-201ENSMUST00000082921 158 ntBASIC12.19□□□□□ -0.46
Cntn1P12960 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.19□□□□□ -0.46
Cntn1P12960 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.19□□□□□ -0.46
Cntn1P12960 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn1P12960 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.18□□□□□ -0.46
Cntn1P12960 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cntn1P12960 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.18□□□□□ -0.46
Cntn1P12960 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.18□□□□□ -0.46
Cntn1P12960 Gm14921-201ENSMUST00000118643 908 ntBASIC12.18□□□□□ -0.46
Cntn1P12960 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn1P12960 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms