Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.68□□□□□ -0.54
Zfp28P10078 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.68□□□□□ -0.54
Zfp28P10078 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.68□□□□□ -0.54
Zfp28P10078 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Zfp28P10078 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Gm7730-201ENSMUST00000212486 454 ntBASIC11.68□□□□□ -0.54
Zfp28P10078 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.68□□□□□ -0.54
Zfp28P10078 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Zfp28P10078 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Zfp28P10078 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.68□□□□□ -0.54
Zfp28P10078 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Zfp28P10078 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Zfp28P10078 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Zfp28P10078 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.67□□□□□ -0.54
Zfp28P10078 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Zfp28P10078 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.67□□□□□ -0.54
Zfp28P10078 Gm13689-201ENSMUST00000119360 685 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 Gm27306-201ENSMUST00000183970 107 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.67□□□□□ -0.54
Zfp28P10078 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Zfp28P10078 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Zfp28P10078 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp28P10078 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.67□□□□□ -0.54
Zfp28P10078 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.66□□□□□ -0.54
Zfp28P10078 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.66□□□□□ -0.54
Zfp28P10078 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.66□□□□□ -0.54
Zfp28P10078 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.66□□□□□ -0.54
Zfp28P10078 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Zfp28P10078 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.66□□□□□ -0.54
Zfp28P10078 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp28P10078 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms