Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm7029-201ENSMUST00000173226 450 ntBASIC13.85□□□□□ -0.19
Chmp6P0C0A3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp6P0C0A3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm19163-201ENSMUST00000223313 780 ntBASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Chmp6P0C0A3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp6P0C0A3 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.83□□□□□ -0.19
Chmp6P0C0A3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.83□□□□□ -0.19
Chmp6P0C0A3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp6P0C0A3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp6P0C0A3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp6P0C0A3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.83□□□□□ -0.19
Chmp6P0C0A3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms