Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.28□□□□□ -0.92
TcraP01849 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.28□□□□□ -0.92
TcraP01849 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.28□□□□□ -0.92
TcraP01849 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Gm14701-201ENSMUST00000117156 348 ntBASIC9.28□□□□□ -0.92
TcraP01849 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
TcraP01849 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Gm29541-201ENSMUST00000191351 678 ntBASIC9.28□□□□□ -0.92
TcraP01849 Gm6916-202ENSMUST00000205523 195 ntBASIC9.28□□□□□ -0.92
TcraP01849 Gm16476-201ENSMUST00000221544 139 ntBASIC9.28□□□□□ -0.92
TcraP01849 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
TcraP01849 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
TcraP01849 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
TcraP01849 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
TcraP01849 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.28□□□□□ -0.92
TcraP01849 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
TcraP01849 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.27□□□□□ -0.92
TcraP01849 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
TcraP01849 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.27□□□□□ -0.93
TcraP01849 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.27□□□□□ -0.93
TcraP01849 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.27□□□□□ -0.93
TcraP01849 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.27□□□□□ -0.93
TcraP01849 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Gm25144-201ENSMUST00000179561 110 ntBASIC9.27□□□□□ -0.93
TcraP01849 Gm25352-201ENSMUST00000179815 110 ntBASIC9.27□□□□□ -0.93
TcraP01849 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.27□□□□□ -0.93
TcraP01849 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.27□□□□□ -0.93
TcraP01849 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
TcraP01849 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.93
TcraP01849 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TcraP01849 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms