Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.31□□□□□ -0.6
Col5a1O88207 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col5a1O88207 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col5a1O88207 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col5a1O88207 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Gm7851-201ENSMUST00000117574 323 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Gm11801-201ENSMUST00000117807 746 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Gm7541-201ENSMUST00000118361 535 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Gm12628-201ENSMUST00000122193 382 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Mir1901-201ENSMUST00000122616 78 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.3□□□□□ -0.6
Col5a1O88207 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.3□□□□□ -0.6
Col5a1O88207 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.3□□□□□ -0.6
Col5a1O88207 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.3□□□□□ -0.6
Col5a1O88207 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Col5a1O88207 Gm12196-201ENSMUST00000120954 262 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 AY036118-201ENSMUST00000200021 923 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.3□□□□□ -0.6
Col5a1O88207 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col5a1O88207 Ginm1-202ENSMUST00000065124 300 ntBASIC11.3□□□□□ -0.6
Col5a1O88207 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col5a1O88207 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Col5a1O88207 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Col5a1O88207 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Col5a1O88207 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.29□□□□□ -0.6
Col5a1O88207 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.29□□□□□ -0.6
Col5a1O88207 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col5a1O88207 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.29□□□□□ -0.6
Col5a1O88207 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.29□□□□□ -0.6
Col5a1O88207 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.29□□□□□ -0.6
Col5a1O88207 Gm37246-201ENSMUST00000192665 835 ntBASIC11.29□□□□□ -0.6
Col5a1O88207 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.29□□□□□ -0.6
Col5a1O88207 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.29□□□□□ -0.6
Col5a1O88207 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.29□□□□□ -0.6
Col5a1O88207 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.29□□□□□ -0.6
Col5a1O88207 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col5a1O88207 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms