Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdmt1O55055 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trdmt1O55055 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trdmt1O55055 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trdmt1O55055 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trdmt1O55055 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trdmt1O55055 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trdmt1O55055 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm15711-201ENSMUST00000118889 535 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.95□□□□□ -0.18
Trdmt1O55055 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm9996-201ENSMUST00000070359 913 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.95□□□□□ -0.18
Trdmt1O55055 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trdmt1O55055 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trdmt1O55055 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.94□□□□□ -0.18
Trdmt1O55055 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.94□□□□□ -0.18
Trdmt1O55055 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.94□□□□□ -0.18
Trdmt1O55055 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gm19994-201ENSMUST00000217086 586 ntBASIC13.94□□□□□ -0.18
Trdmt1O55055 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.94□□□□□ -0.18
Trdmt1O55055 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.94□□□□□ -0.18
Trdmt1O55055 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.94□□□□□ -0.18
Trdmt1O55055 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trdmt1O55055 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trdmt1O55055 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms