Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf13O54965 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rnf13O54965 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf13O54965 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gm14057-201ENSMUST00000120631 482 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gm16215-201ENSMUST00000161990 637 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf13O54965 Mir7023-201ENSMUST00000185093 64 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 Gm44069-201ENSMUST00000204898 506 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.51□□□□□ -0.57
Rnf13O54965 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf13O54965 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf13O54965 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf13O54965 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.51□□□□□ -0.57
Rnf13O54965 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Rnf13O54965 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf13O54965 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Rnf13O54965 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Rnf13O54965 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Gm15920-201ENSMUST00000118998 402 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Gm18307-201ENSMUST00000206864 949 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Gm6218-201ENSMUST00000219812 628 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Itm2b-204ENSMUST00000228637 783 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.5□□□□□ -0.57
Rnf13O54965 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf13O54965 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf13O54965 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms