Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.17□□□□□ -0.14
Sptlc1O35704 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sptlc1O35704 Gm18871-201ENSMUST00000218655 745 ntBASIC14.17□□□□□ -0.14
Sptlc1O35704 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.17□□□□□ -0.14
Sptlc1O35704 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.17□□□□□ -0.14
Sptlc1O35704 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sptlc1O35704 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sptlc1O35704 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Daam2-202ENSMUST00000224595 1926 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm12997-201ENSMUST00000120207 640 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm25843-201ENSMUST00000122582 314 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm22764-201ENSMUST00000158370 92 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm26461-201ENSMUST00000175064 290 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm2546-201ENSMUST00000182630 991 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm27427-201ENSMUST00000185134 193 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.16□□□□□ -0.14
Sptlc1O35704 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.16□□□□□ -0.14
Sptlc1O35704 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sptlc1O35704 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sptlc1O35704 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.15□□□□□ -0.14
Sptlc1O35704 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm13875-201ENSMUST00000120162 282 ntBASIC14.15□□□□□ -0.14
Sptlc1O35704 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm23673-201ENSMUST00000157474 298 ntBASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm26956-201ENSMUST00000182176 986 ntBASIC14.15□□□□□ -0.14
Sptlc1O35704 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sptlc1O35704 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sptlc1O35704 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms