Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm11531-201ENSMUST00000117614 555 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Gm9062-201ENSMUST00000117712 727 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm8738-201ENSMUST00000172606 329 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm38210-201ENSMUST00000191944 809 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Phox2bO35690 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Ermard-209ENSMUST00000226561 1019 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Phox2bO35690 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Phox2bO35690 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.01□□□□□ -0.33
Phox2bO35690 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phox2bO35690 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Gm44065-201ENSMUST00000203184 3527 ntBASIC13□□□□□ -0.33
Phox2bO35690 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Gm38102-201ENSMUST00000192791 1935 ntBASIC13□□□□□ -0.33
Phox2bO35690 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Gm6159-201ENSMUST00000191249 1724 ntBASIC13□□□□□ -0.33
Phox2bO35690 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13□□□□□ -0.33
Phox2bO35690 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Gm25214-201ENSMUST00000104573 129 ntBASIC13□□□□□ -0.33
Phox2bO35690 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13□□□□□ -0.33
Phox2bO35690 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13□□□□□ -0.33
Phox2bO35690 Gm14350-201ENSMUST00000116642 640 ntBASIC13□□□□□ -0.33
Phox2bO35690 Gm12001-201ENSMUST00000121727 913 ntBASIC13□□□□□ -0.33
Phox2bO35690 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Phox2bO35690 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13□□□□□ -0.33
Phox2bO35690 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13□□□□□ -0.33
Phox2bO35690 Gm17889-201ENSMUST00000198410 598 ntBASIC13□□□□□ -0.33
Phox2bO35690 Gm20177-201ENSMUST00000203705 334 ntBASIC13□□□□□ -0.33
Phox2bO35690 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC13□□□□□ -0.33
Phox2bO35690 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Phox2bO35690 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13□□□□□ -0.33
Phox2bO35690 Gm19163-201ENSMUST00000223313 780 ntBASIC13□□□□□ -0.33
Phox2bO35690 AC159103.1-201ENSMUST00000228325 429 ntBASIC13□□□□□ -0.33
Phox2bO35690 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13□□□□□ -0.33
Phox2bO35690 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 Gm16372-201ENSMUST00000073088 450 ntBASIC13□□□□□ -0.33
Phox2bO35690 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phox2bO35690 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms