Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Gm21092-201ENSMUST00000178995 955 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC19.17■□□□□ 0.66
Polr1aO35134 Gm38210-201ENSMUST00000191944 809 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Gm9132-201ENSMUST00000210182 832 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Polr1aO35134 Gm2517-201ENSMUST00000215651 348 ntBASIC19.17■□□□□ 0.66
Polr1aO35134 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Polr1aO35134 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Polr1aO35134 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Polr1aO35134 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Polr1aO35134 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Gm23912-201ENSMUST00000104687 87 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Polr1aO35134 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC19.16■□□□□ 0.66
Polr1aO35134 Gm11663-201ENSMUST00000117888 290 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Polr1aO35134 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC19.16■□□□□ 0.66
Polr1aO35134 Gm7666-201ENSMUST00000146631 819 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC19.16■□□□□ 0.66
Polr1aO35134 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC19.16■□□□□ 0.66
Polr1aO35134 Mir8115-201ENSMUST00000184992 119 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 Gm29499-201ENSMUST00000189151 486 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 Gm28329-201ENSMUST00000191208 689 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 Gm29171-201ENSMUST00000191397 486 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC19.16■□□□□ 0.66
Polr1aO35134 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC19.16■□□□□ 0.66
Polr1aO35134 CT030637.1-201ENSMUST00000228016 669 ntBASIC19.16■□□□□ 0.66
Polr1aO35134 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Polr1aO35134 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Polr1aO35134 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Polr1aO35134 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Polr1aO35134 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC19.15■□□□□ 0.66
Polr1aO35134 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC19.15■□□□□ 0.66
Polr1aO35134 AC134860.1-201ENSMUST00000224867 660 ntBASIC19.15■□□□□ 0.66
Polr1aO35134 AC121960.1-201ENSMUST00000227982 564 ntBASIC19.15■□□□□ 0.66
Polr1aO35134 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr1aO35134 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Polr1aO35134 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Polr1aO35134 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Polr1aO35134 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr1aO35134 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr1aO35134 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr1aO35134 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC19.14■□□□□ 0.66
Polr1aO35134 Gm12407-201ENSMUST00000180219 324 ntBASIC19.14■□□□□ 0.66
Polr1aO35134 Gm38117-201ENSMUST00000194653 939 ntBASIC19.14■□□□□ 0.66
Polr1aO35134 Gm7395-201ENSMUST00000216059 1045 ntBASIC19.14■□□□□ 0.66
Polr1aO35134 AC112945.1-201ENSMUST00000226413 514 ntBASIC19.14■□□□□ 0.66
Polr1aO35134 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC19.14■□□□□ 0.65
Polr1aO35134 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Polr1aO35134 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.14■□□□□ 0.65
Polr1aO35134 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Gm16166-201ENSMUST00000118291 787 ntBASIC19.14■□□□□ 0.65
Polr1aO35134 Gm12899-201ENSMUST00000120565 551 ntBASIC19.14■□□□□ 0.65
Polr1aO35134 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC19.14■□□□□ 0.65
Polr1aO35134 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Polr1aO35134 Gm43520-201ENSMUST00000197996 164 ntBASIC19.14■□□□□ 0.65
Polr1aO35134 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC19.14■□□□□ 0.65
Polr1aO35134 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr1aO35134 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC19.13■□□□□ 0.65
Polr1aO35134 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms