Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm11637-201ENSMUST00000120601 592 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm6222-202ENSMUST00000182143 629 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm37489-201ENSMUST00000191883 159 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm6334-201ENSMUST00000207083 228 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm45865-201ENSMUST00000211815 945 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.33□□□□□ -0.6
Sh2b3O09039 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm24526-201ENSMUST00000082921 158 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sh2b3O09039 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sh2b3O09039 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Sh2b3O09039 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.33□□□□□ -0.6
Sh2b3O09039 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2b3O09039 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.32□□□□□ -0.6
Sh2b3O09039 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm15370-201ENSMUST00000117158 253 ntBASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm16479-201ENSMUST00000121706 932 ntBASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.32□□□□□ -0.6
Sh2b3O09039 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm19163-201ENSMUST00000223313 780 ntBASIC11.32□□□□□ -0.6
Sh2b3O09039 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.32□□□□□ -0.6
Sh2b3O09039 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.32□□□□□ -0.6
Sh2b3O09039 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh2b3O09039 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2b3O09039 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Sh2b3O09039 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.31□□□□□ -0.6
Sh2b3O09039 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sh2b3O09039 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sh2b3O09039 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.31□□□□□ -0.6
Sh2b3O09039 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2b3O09039 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sh2b3O09039 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sh2b3O09039 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms